Probable Hexamers bbbbbbb  =
;
hhhhhhhhhhhhhhhhhhh bbbbbbb bbb bbb hhh
1. +  =
;
+ &nb=
sp;
+ &nb=
sp;
+ +=
+ + +
Pseudomonas putida XylHa PIAQIHIL-E----GR=
span>---SDEQKETLIREVSEAISRSLDAPLTSVRVIIT=
EMAKGH-FGIGGELASKVRR
Pseudomonas stutzeri NahJ PIAQIHIL-E--=
--GR---SDEQKETLIREVSEAI=
SRSLDAPLTSVRVIIT=
EMPKVH-FGIGGESAKAIGR
Pseudomonas sp. DmpI PIAQLYII-E----GR=
span>---TDEQKETLIRQVSEAMANSLDAPLERVRVLIT=
EMPKNH-FGIGGEPASKVRR
Pseudomonas putida NahJ PIAQLYIL-E--=
--GR---SDEQKETLIREVSEAM=
SRSLDAPIERVRVIIT=
EMPKNH-FGIGGEPASKLNR
Pseudomonas putida TdnL PFAQIYMI-E--=
--GR---TEAQKKAVIEKVSQAL=
VEATGAPMANVRVWIQ=
EVPKEN-WGIAGVSAKELGR
Comamonas testosteroni AphI PFAQIYML-E--=
--GR---SEEQKKAVIEKVTRAL=
VEAVGAPSANVRVWIH=
DVPKEN-WGIAGVSAKELGR
Ralstonia solanacearum Rsp0893 PLIQVTLI-E--=
--GR---TMEAKAALIGSLTQAA=
VATLGAPRESVRVIIQ=
EVPAAH-WGVAGVPKSAAKEPPR=
DSKA
Novosphingobium aromaticivorans XylH PIIEVNLF-E--=
--GR---PPEAKERLIKALTDAA=
IDAIGAPRESVRVILR=
EMAPAH-FAVGGLSFAAKAAAAA=
AAQPRVEEDWSNEN
Sphingomonas chungbukensis PhnL PIIEVNLL-E--=
--GR---PPEAKERLIRALTDAA=
IGAIGAPRESVRVILR=
EMDPAH-FAVGGVSFAAKAAAAQ=
PRVEEDWSNEA
2.
Staphylococcus aureus SAV1363 =
PIVNVKLL-E--=
--GR---SDEQLKNL=
VSEVTDAVEKTTGANRQAIHVVIE=
EMKPNH-YGVAGVRKSDQ
Bacillus halodurans BH3814 PIVTVKFL-E--=
--GR---SDEQKRALVERVTEAV=
AETIQANPEKIHVVLE=
EMRKDH-YGVAGKRISDQ
Listeria innocua Lin2709
PFVTIQFL-E--=
--GR---SDDQKKALVSEVTDVV=
SKNLKAPKENIHVILE=
EMKKTD-YGVGGVRKSDI
Listeria monocytogenes Lmo2564 PFVTIQFL-E--=
--GR---TDDQKKALVSEVTEVV=
SKNLKAPKENIHVILE=
EMKKTD-YGVGGVRKSDI
Streptococcus pyogenes Spy1139 PFVTIDLF-E--=
--GR---SQEQKNQLAREVTEVV=
SRIAKAPKENIHVFIN=
DMPEGT-YYPQ<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GEMKQKS
Streptococcus thermophilus 4-OT PFVKIDLF-E--=
--GR---SEEQKIELAREVTEVV=
SRVAKAPKEAIHVFIN=
DMPEGT-YYPH<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GEMKKKN
Streptococcus pneumoniae SP1017 PFVRIDLF-E--=
--GR---TLEQKKALAKEVTEAV=
VRNTGAPQSAVHVIIN=
DMPEGT-YFPQ<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GEMRTK
8Lactococ=
cus
lactis XylH PYVHVELF-E--=
--GR---TVEQKAIIAKEITESI=
SKHAGAPTSAIHVIFN=
DLPEGM-LYQG<=
/span>GEMKKKK
Bacillus subtilis YwhB PYVTVKML-E----GR=
span>---TDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDH-YAVA<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GKRLSDME
3.
Helicobacter pylori HP0924 PFINIKLVPE--NGGP---TNEQKQQLIEGVSDLM=
VKVLNKNKASIVVIID<=
/span>EVDSNN-YGLGGESVHHLRQKN =
Campylobacter jejuni Cj1255 PFVNIRITKE--=
NGEP---TTEQKQELIAGVTDLL=
AKVLNKNKSSTVVIID<=
/span>EIDTDN-YGLGGKSITQARKEKS=
Neisseria meningitidis NMB1474 PYVNIKVTGG--=
KEAP---TAAQKAELIGGVTELL=
ARVLGKNPETTVVVID<=
/span>EVDTDN-WGIGGKSVSERRKEGR=
Yersinia pestis YPO3989
PYVNIKITREG-=
------ATAEQKKQLIAGVTQLL=
VDTLGKNPATTVVVID<=
/span>EVETDN-WGIGGRSVTDLRQSS =
Erwinia chrysanthemi YkdK PFVNIRITKDG-=
------VTAEQKKQLIAGVTQLL=
VDTLGKNPATTVVIID<=
/span>EVETDN-WGIGGESVTERRQQAH=
DRKHNV
Campylobacter jejuni Cj0270 PLVNIKLAKPS-=
------LSKEQKAELIADITELL=
STKYNKSKERVVVVLE<=
/span>DVENYD-IGFGGESVEAIKAKAS=
K
Caulobacter crescentus CC2975 PYVNIQVTREG-=
------VTREQKARLIDGVTTLL=
AEVLGKDPNTTFVVIE<=
/span>EVALEN-WGVGGLPVEAYRARKR=
PAAT
Sinorhizobium meliloti SMb20209
PIVTVQVTREGS=
APGRNSVTAEEKAAIIKGVSEVL=
LDVLNKPLESTYVVIE<=
/span>EVELDN-WGWGGFPTVQFRRQRA=
ETARS
4.
Archaeoglobus fulgidus AF0669 PVLIVYGP---------KLDVGKKREFVERLTSVA=
AEIYGMDRSAITILIHEPPAEN-VGVGGKLIADRERE <=
span
style=3D'mso-tab-count:2;width:10.93%'>
M. thermoautotrophicum MTH1606 PVIQINCN----=
-----ELTREKKRELVKRITEVS=
SEIMGLPESTITVLIREFPPEM-WGLEVHSSVTGSE=
WFLMGVSPR
Streptomyces coelicolor SCD31.07
PFAHFKVP----=
---AGTLSAEDKKKIVERTTDLY=
AEIYGERARPTTVVLVDEVPD=
GGWGVAGNVLTAAMLNGD=
G
Mesorhizobium loti msl4326
PFVNIRIVKE--=
---VIAADPAGKKADIAKKVTAA=
IMEATGLGNDDVWVVFEEVNARDWYV-<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GKTDVETLRKG =
Ralstonia solanacearum RSc0807 PTFHIEMF-E--=
--GR---SADQKRKLVEEVTRVT=
CETLGCAPGAVDIIIAEVKREN-WATGGVLWSEQK
Nostoc PCC7120
asr0697 PFVTVKIA-R--=
--GH---SIEKKRHLVEAITNAL=
VTALDTKPEWITIHIDEFEREN-WAVN<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GILHCDRHRGRH=
DETGR
Ralstonia solanacearum RSp1151 PVVRVSWF-E--=
--GK---DAKAKKAVAAEITDSI=
VKHAGTDPKYIYVIFEDIKPSD-WAGA<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GRLYGEEPGTP =
Mesorhizobium loti msl1978
PFANIKLP----=
---QAALSKAQKEDLIHRTTAMF=
VDFFGEGVRPTTMVLVEEVADGGYGRADEVFVIPEA=
YRAKE =
Pseudomonas pavonaceae CaaD1 (a)
PMISCDMR-Y--=
--GR---TDEQKRALSAGLLRVI=
SEATGEPRENIFFVIREGSGIN-FVEH<=
span
style=3D'font-family:"Courier New";mso-ascii-font-family:"Courier New";
mso-bidi-font-family:"Courier New";mso-hansi-font-family:"Courier New";
font-size:33%;color:black'>GEHLPDYVPGNA=
NDKALIAKLK
Pseudomonas pavonaceae CaaD2 (b)
PFIECHIA-T--=
--GL---SVARKQQLIRDVIDVT=
NKSIGSDPKIINVLLVEHAEAN-MSIS<=
/span>GRIHGEAASTER=
TPAVS
Probable
Dimers
5. <=
/b>bbbbbbb  =
;
hhhhhhhhhhhhhhhhhhh bbb=
bbbb hhhhhhhhhh
=
;
Escherichia coli YdcE PHIDIKCF------PREL-DEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPES-W-QAIWDAEIAP=
QMEALIKKPGYSMNA
Xylella fastidiosa XF1725 PHIIVKIA-E--=
--GR---SQPLKQELADRLAATM=
MDVLGLDSSAVSVAVEDVPMQD-WMQQVYGPDIET=
AGERLLKRPGYGQLASPPEE=
span>
<=
/span>
P =
span>R  =
;
K R<=
/span>
K <=
/span> E<=
/span> F G